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Showing below up to 50 results in range #121 to #170.
- List of output files for PATHSAMPLE
- Loading coordinate files into VMD with the help of an AMBER topology file
- Main Page
- Makerestart
- Maui compilation
- Mek-quake Queueing system
- Mek-quake initial setup notes
- Minimizing a structure using OPTIM and AMBER9
- Mounting sharedscratch locally
- NECI
- NECI-testcode
- NECI Parallelization
- NECI Re-write
- New mek-quake
- OPTIM
- OPTIM output files
- OPTIM output files (some of the them at least)
- OS X and Linux tips
- Optimising a path
- Organizing papers with tellico
- Other IT stuff
- Other useful scripts
- PATHSAMPLE
- ParallelCode
- Path.info file is not read, causes PATHSAMPLE to die
- Path2pdb.py
- Path2xyz.py
- Pdb to movie.py
- Performing a normal mode analysis of a biomolecule using OPTIM (AMBER and CHARMM)
- Perm-pdb.py
- Perm-prmtop.py
- Pgi64/8.0/1
- Piping and redirecting output from one command or file to another
- Plotting data in real time
- Preparing an AMBER topology file for a protein plus ligand system
- Preparing an AMBER topology file for a protein system
- Printing files from the command line using 'lpr'
- Producing a PDB from a coordinates and topology file
- Producing sexy ray-traced images
- Programming
- Progress
- Proposed changes to backup and archiving
- Pymol
- Quick guide to awk
- REMD with AMBER
- REX (Replica EXchange MD) with the MMTSB-toolset
- Rama upgrade
- Recommended bash aliases
- Relaxing existing minima with new potential and creating new database
- Relaxing existing transition states with new potential and creating new database