Most linked-to pages

Showing below up to 100 results in range #1 to #100.

View (previous 100 | next 100) (20 | 50 | 100 | 250 | 500)

1. GMIN‏‎ (35 links)
2. OPTIM‏‎ (32 links)
3. AMBER‏‎ (30 links)
4. PATHSAMPLE‏‎ (29 links)
5. CHARMM‏‎ (15 links)
6. User:Mp466‏‎ (11 links)
7. User:Csw34‏‎ (10 links)
8. User:Ss2029‏‎ (8 links)
9. DisconnectionDPS‏‎ (7 links)
10. CamCASP‏‎ (6 links)
11. VMD‏‎ (6 links)
12. User:Cen1001‏‎ (6 links)
13. Setting up‏‎ (6 links)
14. Pymol‏‎ (6 links)
15. GenCoords‏‎ (5 links)
16. PY‏‎ (5 links)
17. Finding an initial path with OPTIM and starting up PATHSAMPLE‏‎ (5 links)
18. Compiling Wales Group codes using cmake‏‎ (5 links)
19. Preparing an AMBER topology file for a protein plus ligand system‏‎ (5 links)
20. PlotGMINms.tcl‏‎ (4 links)
21. GenCoords Models‏‎ (4 links)
22. Ellipsoid.model‏‎ (4 links)
23. Finding an initial path with OPTIM and starting up PATHSAMPLE (CHARMM)‏‎ (4 links)
24. A guide to using SLURM to run GPU jobs on pat‏‎ (4 links)
25. SVN setup‏‎ (4 links)
26. Converting between '.crd' and '.pdb'‏‎ (3 links)
27. Jenkins CI‏‎ (3 links)
28. Short 'sed' examples‏‎ (3 links)
29. Submitting jobs, interactively or to a cluster queue system‏‎ (3 links)
30. User:Jss43‏‎ (3 links)
31. Symmetrising AMBER topology files‏‎ (3 links)
32. List of output files for PATHSAMPLE‏‎ (3 links)
33. Performing a normal mode analysis of a biomolecule using OPTIM (AMBER and CHARMM)‏‎ (3 links)
34. Compiling GMIN using CMAKE‏‎ (3 links)
35. DMACRYS interface‏‎ (3 links)
36. Producing sexy ray-traced images‏‎ (3 links)
37. Connecting two minima with a pathway‏‎ (3 links)
38. Wales Group Version control‏‎ (3 links)
39. Compiling GMIN with CHARMM‏‎ (3 links)
40. Ellipsoid.model.xyz‏‎ (3 links)
41. GMIN MOVES module‏‎ (3 links)
42. Installing and setting up the MMTSB toolset‏‎ (3 links)
43. Makerestart‏‎ (3 links)
44. Mutational BH steps‏‎ (3 links)
45. Creating movies (.mpg) of paths using OPTIM‏‎ (3 links)
46. A guide to using SLURM to run PATHSAMPLE‏‎ (3 links)
47. Ellipsoid.xyz‏‎ (3 links)
48. Generating parameters using AMBER's built in General Forcefield (gaff)‏‎ (3 links)
49. SuSE 10.1 workstation image‏‎ (3 links)
50. User:Jmc49‏‎ (3 links)
51. Conversion between different data file formats‏‎ (3 links)
52. Pysites.xyz‏‎ (3 links)
53. Maui compilation‏‎ (3 links)
54. Perm-prmtop.py‏‎ (3 links)
55. Visualising normal modes using VMD and OPTIM‏‎ (3 links)
56. Conversion between different image file formats‏‎ (3 links)
57. Alternatively, making the initial path with PATHSAMPLE itself (CHARMM)‏‎ (2 links)
58. Using GMIN to generate endpoints (CHARMM)‏‎ (2 links)
59. Backup strategy‏‎ (2 links)
60. Useful .vmdrc file‏‎ (2 links)
61. Branching and Merging‏‎ (2 links)
62. Xmgrace‏‎ (2 links)
63. User:Am592‏‎ (2 links)
64. Computer Office services‏‎ (2 links)
65. Differences from Clust‏‎ (2 links)
66. Finding bugs in latex documents that will not compile‏‎ (2 links)
67. Getting started with SLURM‏‎ (2 links)
68. Identifying job on a node‏‎ (2 links)
69. Loading coordinate files into VMD with the help of an AMBER topology file‏‎ (2 links)
70. Mek-quake initial setup notes‏‎ (2 links)
71. Path2xyz.py‏‎ (2 links)
72. Piping and redirecting output from one command or file to another‏‎ (2 links)
73. Python interface for GMIN/OPTIM‏‎ (2 links)
74. Removing an excessive number of files from a directory - when 'rm' just isn't enough‏‎ (2 links)
75. Short 'awk' examples‏‎ (2 links)
76. If things go wrong...‏‎ (2 links)
77. Removing minima and transition states from the database‏‎ (2 links)
78. Minimizing a structure using OPTIM and CHARMM‏‎ (2 links)
79. Expanding the kinetic transition network with PATHSAMPLE‏‎ (2 links)
80. Pathsampling short paths‏‎ (2 links)
81. Advanced colouring‏‎ (2 links)
82. Tardis scheduling policy‏‎ (2 links)
83. Bash history searching‏‎ (2 links)
84. Using 'ssh-keygen' to automatically log you into clusters from your workstation‏‎ (2 links)
85. Computing CHARMM FF energy using GMIN, MMTSB and CHARMM‏‎ (2 links)
86. Dijkstra test.py‏‎ (2 links)
87. Extracting information from a REX simulation‏‎ (2 links)
88. Keywords‏‎ (2 links)
89. Mercurial‏‎ (2 links)
90. Pathway Gap Filling Post-CHECKSPMUTATE‏‎ (2 links)
91. Printing files from the command line using 'lpr'‏‎ (2 links)
92. Quasi-continuous interpolation for biomolecules‏‎ (2 links)
93. If you lost file min.data, but still you have points.min‏‎ (2 links)
94. Using BHINTERP to find minima between two end points‏‎ (2 links)
95. OPTIM output files‏‎ (2 links)
96. Expanding the kinetic transition network with PATHSAMPLE (CHARMM)‏‎ (2 links)
97. Bash loop tricks‏‎ (2 links)
98. Using AMBER 14 on the GPU and compute clusters‏‎ (2 links)
99. CHECKSPMUTATE‏‎ (2 links)
100. Colourdiscon.py‏‎ (2 links)

View (previous 100 | next 100) (20 | 50 | 100 | 250 | 500)