Pages that link to "AMBER"
← AMBER
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The following pages link to AMBER:
Displayed 30 items.
View (previous 50 | next 50) (20 | 50 | 100 | 250 | 500)- GMIN (← links)
- Setting up (← links)
- Using GMIN to generate endpoints (← links)
- Finding an initial path with OPTIM and starting up PATHSAMPLE (← links)
- Finding an initial path between two end points (minima) (← links)
- Comprehensive Contents Page (← links)
- Wales Group (← links)
- SVN setup (← links)
- Wales Group Version control (← links)
- Calculating binding free energy using the FSA method (← links)
- Ligand binding-mode searches with HBONDMATRIX (← links)
- Makerestart (← links)
- Perm-pdb.py (← links)
- Using BHINTERP to find minima between two end points (← links)
- Relaxing existing minima with new potential and creating new database (← links)
- Relaxing existing transition states with new potential and creating new database (← links)
- Using AMBER 14 on the GPU and compute clusters (← links)
- Generating parameters using AMBER's built in General Forcefield (gaff) (← links)
- Generating parameters using RESP charges from GAMESS-US (← links)
- Simple scripts for LEaP to create topology and coordinate files (← links)
- Preparing an AMBER topology file for a protein system (← links)
- Preparing an AMBER topology file for a protein plus ligand system (← links)
- Symmetrising AMBER topology files (← links)
- Producing a PDB from a coordinates and topology file (← links)
- REMD with AMBER (← links)
- Performing a hydrogen-bond analysis (← links)
- Advanced colouring (← links)
- Conversion between different data file formats (← links)
- Connecting Sub-databases (← links)
- CHECKSPMUTATE (← links)