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1. AMBER
2. A guide to using SLURM to run GPU jobs on pat
3. A guide to using SLURM to run PATHSAMPLE
4. Adding a model for PATHSAMPLE
5. Adding a model to GMIN
6. Adding a model to OPTIM
7. Adding partially finished OPTIM stationary points to a PATHSAMPLE database
8. Adding several minima obtained using GMIN (maybe using BHPT) to min.data
9. Advanced colouring
10. Allowing read access to your directories
11. Alternatively, making the initial path with PATHSAMPLE itself
12. Alternatively, making the initial path with PATHSAMPLE itself (CHARMM)
13. Amberinterface
14. Angle-axis framework
15. Automatic Rigid Body Grouping
16. Aux2bib
17. BLJ60 example input
18. BLJ60 example setup
19. Backup strategy
20. Bash history searching
21. Bash loop tricks
22. Basic linux commands everyone should know!
23. Beginner's guide to working in Wales group
24. Biomolecules in PATHSAMPLE
25. Biomolecules in the energy landscape framework
26. Blacklisting Compilers
27. Branching and Merging
28. CAMSHIFT
29. CHARMM
30. CHECKSPMUTATE
31. CPMDInput
32. Calculating binding free energy using the FSA method
33. Calculating energy of a conformation
34. Calculating molecular properties
35. Calculating order parameters
36. Calculating rate constants (GT and fastest path)
37. Calculating rate constants (SGT, DGT, and SDGT)
38. CamCASP/Bugs
39. CamCASP/CodeExamples/DirectAccess
40. CamCASP/Notes
41. CamCASP/Programming
42. CamCASP/Programming/5/example1
43. CamCASP/ToDo/Memory
44. CamCASP/ToDo/diskIO
45. CamCasp
46. Chain crossing
47. Cmake interface building
48. Colourdiscon.py
49. Common setup problem : No Frequency Warning
50. Compiler Flags

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