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Showing below up to 50 results in range #1 to #50.

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  1. The effect of calculating less than the maximum number of eigenvalues using ENDHESS n‏‎ (15:04, 14 March 2011)
  2. Performing a normal mode analysis of a biomolecule using OPTIM (AMBER and CHARMM)‏‎ (15:12, 14 March 2011)
  3. Debugging odd transition states in OPTIM‏‎ (15:47, 14 March 2011)
  4. Expanding the kinetic transition network with PATHSAMPLE‏‎ (15:51, 14 March 2011)
  5. Minimizing a structure using OPTIM and AMBER9‏‎ (16:07, 14 March 2011)
  6. List of output files for PATHSAMPLE‏‎ (17:46, 14 March 2011)
  7. Calculating rate constants (GT and fastest path)‏‎ (17:50, 14 March 2011)
  8. Removing minima and transition states from the database‏‎ (17:59, 17 March 2011)
  9. Finding an initial path with OPTIM and starting up PATHSAMPLE‏‎ (13:50, 6 May 2011)
  10. Using GMIN to generate endpoints‏‎ (16:19, 24 May 2011)
  11. Loading OPTIM's min.data.info files into PATHSAMPLE‏‎ (15:28, 26 May 2011)
  12. Setting up‏‎ (12:25, 29 June 2011)
  13. Pathsampling short paths‏‎ (18:34, 9 September 2011)
  14. Optimising a path‏‎ (18:38, 9 September 2011)
  15. Connecting two minima with a pathway‏‎ (18:52, 7 February 2012)
  16. Setting up (CHARMM)‏‎ (15:52, 8 February 2012)
  17. Using GMIN to generate endpoints (CHARMM)‏‎ (15:54, 8 February 2012)
  18. Expanding the kinetic transition network with PATHSAMPLE (CHARMM)‏‎ (18:11, 4 February 2013)
  19. Pathsampling short paths (CHARMM)‏‎ (18:15, 4 February 2013)
  20. Minimizing a structure using OPTIM and CHARMM‏‎ (18:38, 4 February 2013)
  21. OPTIM‏‎ (12:10, 11 September 2013)
  22. Instanton tunneling and classical rate calculations with OPTIM‏‎ (12:19, 11 September 2013)
  23. GMIN‏‎ (12:20, 20 September 2013)
  24. Finding an initial path with OPTIM and starting up PATHSAMPLE (CHARMM)‏‎ (16:21, 13 November 2013)
  25. OPTIM output files‏‎ (13:43, 4 February 2014)
  26. Adding a model to OPTIM‏‎ (13:53, 4 February 2014)
  27. Compiling Wales Group code using CMake‏‎ (16:02, 3 July 2014)
  28. DisconnectionDPS‏‎ (14:36, 27 November 2014)
  29. Creating movies (.mpg) of paths using OPTIM‏‎ (14:04, 10 August 2015)
  30. Finding an initial path between two end points (minima)‏‎ (18:47, 1 February 2016)
  31. BLJ60 example input‏‎ (18:54, 1 February 2016)
  32. Alternatively, making the initial path with PATHSAMPLE itself‏‎ (18:56, 1 February 2016)
  33. Alternatively, making the initial path with PATHSAMPLE itself (CHARMM)‏‎ (18:59, 1 February 2016)
  34. ElaborateDiff‏‎ (17:33, 10 May 2019)
  35. Jenkins CI‏‎ (17:55, 10 May 2019)
  36. Branching and Merging‏‎ (17:57, 10 May 2019)
  37. Cmake interface building‏‎ (17:58, 10 May 2019)
  38. Installing python modules‏‎ (17:58, 10 May 2019)
  39. Revamping the modules system‏‎ (17:59, 10 May 2019)
  40. CHARMM‏‎ (17:59, 10 May 2019)
  41. Running Wales Group software on Windows 7‏‎ (18:04, 10 May 2019)
  42. Pele‏‎ (18:05, 10 May 2019)
  43. Adding a model to GMIN‏‎ (18:06, 10 May 2019)
  44. Selecting search parameters for GMIN‏‎ (18:06, 10 May 2019)
  45. Global optimization of biomolecules using CHARMM‏‎ (18:07, 10 May 2019)
  46. Global optimization of biomolecules using AMBER9‏‎ (18:08, 10 May 2019)
  47. Global optimization of biomolecules using AMBER9 with Structural Restraints‏‎ (18:08, 10 May 2019)
  48. Calculating binding free energy using the FSA method‏‎ (18:09, 10 May 2019)
  49. Restarting a GMIN run from a dump file‏‎ (18:09, 10 May 2019)
  50. Using the implicit membrane model IMM1‏‎ (18:09, 10 May 2019)

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