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  1. Connecting Sub-databases‏‎ (98 revisions)
  2. GMIN‏‎ (94 revisions)
  3. CHECKSPMUTATE‏‎ (66 revisions)
  4. Main Page‏‎ (57 revisions)
  5. Pathway Gap Filling Post-CHECKSPMUTATE‏‎ (45 revisions)
  6. Finding an initial path with OPTIM and starting up PATHSAMPLE (CHARMM)‏‎ (37 revisions)
  7. Git Workflow‏‎ (35 revisions)
  8. Comprehensive Contents Page‏‎ (33 revisions)
  9. Preparing input files for a peptide using AMBER‏‎ (25 revisions)
  10. Setting up (CHARMM)‏‎ (15 revisions)
  11. Creating mismatched DNA duplex using NAB‏‎ (15 revisions)
  12. Loading OPTIM's min.data.info files into PATHSAMPLE‏‎ (13 revisions)
  13. PATHSAMPLE‏‎ (12 revisions)
  14. DisconnectionDPS‏‎ (11 revisions)
  15. Using GMIN to generate endpoints (CHARMM)‏‎ (11 revisions)
  16. Creating movies (.mpg) of paths using OPTIM‏‎ (10 revisions)
  17. Compiling Wales Group codes using cmake‏‎ (10 revisions)
  18. Beginner's guide to working in Wales group‏‎ (8 revisions)
  19. Compiling Wales Group code using CMake‏‎ (7 revisions)
  20. Alternatively, making the initial path with PATHSAMPLE itself (CHARMM)‏‎ (6 revisions)
  21. Wales Group Version control‏‎ (5 revisions)
  22. Pathsampling short paths‏‎ (5 revisions)
  23. Interactive jobs on cluster‏‎ (4 revisions)
  24. Setting up‏‎ (4 revisions)
  25. VMD‏‎ (4 revisions)
  26. Wales Group‏‎ (4 revisions)
  27. Using GMIN to generate endpoints‏‎ (4 revisions)
  28. Adding a model to OPTIM‏‎ (4 revisions)
  29. Finding an initial path with OPTIM and starting up PATHSAMPLE‏‎ (4 revisions)
  30. SVN setup‏‎ (4 revisions)
  31. OPTIM‏‎ (3 revisions)
  32. Alternatively, making the initial path with PATHSAMPLE itself‏‎ (3 revisions)
  33. Connecting two minima with a pathway‏‎ (3 revisions)
  34. Optimising a path‏‎ (3 revisions)
  35. AMBER‏‎ (3 revisions)
  36. BLJ60 example input‏‎ (3 revisions)
  37. Common setup problem : No Frequency Warning‏‎ (3 revisions)
  38. Minimizing a structure using OPTIM and CHARMM‏‎ (3 revisions)
  39. DISCOTRESS‏‎ (3 revisions)
  40. Getting started with SLURM‏‎ (3 revisions)
  41. Decoding heat capacity curves‏‎ (2 revisions)
  42. OPTIM output files‏‎ (2 revisions)
  43. Minimizing a structure using OPTIM and AMBER9‏‎ (2 revisions)
  44. Finding an initial path between two end points (minima)‏‎ (2 revisions)
  45. No Frequency Warning‏‎ (2 revisions)
  46. STARTING INITIAL PATH JOBS WITH PATHSAMPLE‏‎ (2 revisions)
  47. Preparing an AMBER topology file for a protein system‏‎ (2 revisions)
  48. Symmetrising AMBER topology files‏‎ (2 revisions)
  49. Using tar and gzip to compress/uncompress files‏‎ (1 revision)
  50. Advanced colouring‏‎ (1 revision)
  51. Biomolecules in the energy landscape framework‏‎ (1 revision)
  52. CamCASP/Programming‏‎ (1 revision)
  53. Computing CHARMM FF energy using GMIN, MMTSB and CHARMM‏‎ (1 revision)
  54. Finding bugs in latex documents that will not compile‏‎ (1 revision)
  55. Global optimization of biomolecules using AMBER9‏‎ (1 revision)
  56. Makerestart‏‎ (1 revision)
  57. Pdb to movie.py‏‎ (1 revision)
  58. Printing files from the command line using 'lpr'‏‎ (1 revision)
  59. Remastering Knoppix‏‎ (1 revision)
  60. Selecting search parameters for GMIN‏‎ (1 revision)
  61. The effect of calculating less than the maximum number of eigenvalues using ENDHESS n‏‎ (1 revision)
  62. Thomson problem in OPTIM‏‎ (1 revision)
  63. Using the implicit membrane model IMM1‏‎ (1 revision)
  64. Allowing read access to your directories‏‎ (1 revision)
  65. Blacklisting Compilers‏‎ (1 revision)
  66. CamCASP/Programming/5/example1‏‎ (1 revision)
  67. Computing normal modes in angle-axis‏‎ (1 revision)
  68. Density of states and thermodynamics from energy distributions at different temperatures‏‎ (1 revision)
  69. Fine tuning UNTRAP‏‎ (1 revision)
  70. Global optimization of biomolecules using AMBER9 with Structural Restraints‏‎ (1 revision)
  71. Jenkins CI‏‎ (1 revision)
  72. Managing interactive jobs on cluster‏‎ (1 revision)
  73. OPTIM/Q-Chem Tutorial‏‎ (1 revision)
  74. Pele‏‎ (1 revision)
  75. Producing a PDB from a coordinates and topology file‏‎ (1 revision)
  76. Removing an excessive number of files from a directory - when 'rm' just isn't enough‏‎ (1 revision)
  77. Torque and Maui‏‎ (1 revision)
  78. Branching and Merging‏‎ (1 revision)
  79. CamCASP/ToDo/Memory‏‎ (1 revision)
  80. Computing values only once‏‎ (1 revision)
  81. Differences from Clust‏‎ (1 revision)
  82. Fixing thunderbird links‏‎ (1 revision)
  83. Global optimization of biomolecules using CHARMM‏‎ (1 revision)
  84. Keywords‏‎ (1 revision)
  85. Maui compilation‏‎ (1 revision)
  86. OPTIM and PY ellipsoids tutorial‏‎ (1 revision)
  87. Performing a hydrogen-bond analysis‏‎ (1 revision)
  88. Producing sexy ray-traced images‏‎ (1 revision)
  89. Removing minima and transition states from the database‏‎ (1 revision)
  90. Transfering files to and from your workstation‏‎ (1 revision)
  91. VMD script to annotate each frame of a trajectory‏‎ (1 revision)
  92. CAMSHIFT‏‎ (1 revision)
  93. CamCASP/ToDo/diskIO‏‎ (1 revision)
  94. Dijkstra test.py‏‎ (1 revision)
  95. Gnuplot‏‎ (1 revision)
  96. LDAP plans‏‎ (1 revision)
  97. Mek-quake Queueing system‏‎ (1 revision)
  98. Performing a normal mode analysis of a biomolecule using OPTIM (AMBER and CHARMM)‏‎ (1 revision)
  99. Program flow‏‎ (1 revision)
  100. Restarting a GMIN run from a dump file‏‎ (1 revision)

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