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Showing below up to 50 results in range #101 to #150.

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  1. Generating parameters using AMBER's built in General Forcefield (gaff)
  2. Generating parameters using RESP charges from GAMESS-US
  3. Generating pdb, crd and psf for a peptide sequence
  4. Getting started with SLURM
  5. Git Workflow
  6. Global optimization of biomolecules using AMBER9
  7. Global optimization of biomolecules using AMBER9 with Structural Restraints
  8. Global optimization of biomolecules using CHARMM
  9. Gnuplot
  10. IMPORTANT: Using PATHSAMPLE safely on sinister
  11. Identifying job on a node
  12. Identifying the k fastest paths between endpoints using KSHORTESTPATHS
  13. If things go wrong...
  14. If you lost file min.data, but still you have points.min
  15. If you need to change the number of atoms (e.g. making a united-atom charmm19 .crd file, or if atoms are missing)
  16. Installing GROMACS on Clust
  17. Installing and setting up the MMTSB toolset
  18. Installing packages on your managed CUC3 workstation
  19. Installing python modules
  20. Instanton tunneling and classical rate calculations with OPTIM
  21. Intel Trace Analyzer and Collector
  22. Interactive jobs on cluster
  23. Jenkins CI
  24. Keywords
  25. LDAP plans
  26. Lapack compilation
  27. Latex2html
  28. Ligand binding-mode searches with HBONDMATRIX
  29. Linear and non-linear regression in gnuplot
  30. List of output files for PATHSAMPLE
  31. Loading AMBER prmtop and inpcrd files into Pymol
  32. Loading OPTIM's min.data.info files into PATHSAMPLE
  33. Loading coordinate files into VMD with the help of an AMBER topology file
  34. Local Rigid Body Framework
  35. Local rigid body in OPTIM
  36. MMTSB-toolset
  37. Main Page
  38. Makerestart
  39. Managing interactive jobs on cluster
  40. Maui compilation
  41. Mek-quake Queueing system
  42. Mek-quake initial setup notes
  43. Mercurial
  44. Migrating to the new SVN server
  45. Minimizing a structure using OPTIM and AMBER9
  46. Minimizing a structure using OPTIM and CHARMM
  47. Mounting sharedscratch locally
  48. Mutational BH steps
  49. NECI Parallelization
  50. New mek-quake

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