User contributions for Nn320

11 October 2021

• 10:4610:46, 11 October 2021 diff hist +174‎ Preparing input files for a peptide using AMBER ‎ →‎Step 4: Symmetrise the topology file so obtained
• 10:1610:16, 11 October 2021 diff hist +1,775‎ Preparing input files for a peptide using AMBER ‎ →‎Step 8: Creating atomgroups file
• 09:3009:30, 11 October 2021 diff hist −6‎ Preparing input files for a peptide using AMBER ‎ →‎Step 6: Check symmetrisation
• 09:2709:27, 11 October 2021 diff hist +114‎ Preparing input files for a peptide using AMBER ‎No edit summary

9 October 2021

• 15:1515:15, 9 October 2021 diff hist +1,160‎ Preparing input files for a peptide using AMBER ‎No edit summary
• 14:5914:59, 9 October 2021 diff hist +106‎ Preparing input files for a peptide using AMBER ‎No edit summary
• 14:5714:57, 9 October 2021 diff hist −2‎ Preparing input files for a peptide using AMBER ‎No edit summary
• 14:5714:57, 9 October 2021 diff hist +3,270‎ Preparing input files for a peptide using AMBER ‎No edit summary

8 October 2021

• 08:1708:17, 8 October 2021 diff hist +900‎ Preparing input files for a peptide using AMBER ‎No edit summary
• 07:5307:53, 8 October 2021 diff hist −5‎ Preparing input files for a peptide using AMBER ‎No edit summary

7 October 2021

• 16:0516:05, 7 October 2021 diff hist +150‎ Preparing input files for a peptide using AMBER ‎No edit summary
• 16:0116:01, 7 October 2021 diff hist +71‎ Comprehensive Contents Page ‎ →‎AMBER
• 16:0016:00, 7 October 2021 diff hist −71‎ AMBER ‎ →‎Tutorials current
• 15:5615:56, 7 October 2021 diff hist +9,135‎ N Preparing input files for a peptide using AMBER ‎ Created page with "How to create input files for a peptide for use with GMIN? The steps given below are when you are trying to use one of the AMBER force fields. Step 0: Having amber on your s..."
• 15:5115:51, 7 October 2021 diff hist +71‎ AMBER ‎ →‎Tutorials

17 September 2021

• 13:2313:23, 17 September 2021 diff hist +474‎ Symmetrising AMBER topology files ‎No edit summary current

22 July 2021

• 14:1314:13, 22 July 2021 diff hist +2‎ Compiling Wales Group codes using cmake ‎No edit summary
• 14:1214:12, 22 July 2021 diff hist +381‎ Compiling Wales Group codes using cmake ‎No edit summary

19 July 2021

• 18:1818:18, 19 July 2021 diff hist +193‎ Preparing an AMBER topology file for a protein system ‎No edit summary current

11 January 2021

• 17:0017:00, 11 January 2021 diff hist +150‎ m Compiling Wales Group codes using cmake ‎ svn replaced with softwarewales

18 May 2020

• 11:2011:20, 18 May 2020 diff hist +2,070‎ N Managing interactive jobs on cluster ‎ Created page with "When using cluster it is important to know how to manage interactive jobs. We may want to know what all jobs are running, what all jobs a particular user is running and how to..." current
• 11:1211:12, 18 May 2020 diff hist +9‎ Comprehensive Contents Page ‎ →‎Cluster queues
• 11:0911:09, 18 May 2020 diff hist +4‎ Interactive jobs on cluster ‎No edit summary current
• 11:0811:08, 18 May 2020 diff hist 0‎ Interactive jobs on cluster ‎No edit summary
• 11:0511:05, 18 May 2020 diff hist +228‎ Interactive jobs on cluster ‎No edit summary
• 10:5510:55, 18 May 2020 diff hist +1,838‎ N Interactive jobs on cluster ‎ Created page with "When using cluster it is important to know how to manage interactive jobs. We may want to know what all jobs are running, what all jobs a particular user is running and how to..."
• 10:1510:15, 18 May 2020 diff hist +34‎ Comprehensive Contents Page ‎ →‎Cluster queues

13 April 2020

• 18:0818:08, 13 April 2020 diff hist −1‎ Beginner's guide to working in Wales group ‎No edit summary
• 15:1515:15, 13 April 2020 diff hist −32‎ Beginner's guide to working in Wales group ‎No edit summary
• 12:2712:27, 13 April 2020 diff hist +9‎ Beginner's guide to working in Wales group ‎No edit summary
• 12:2512:25, 13 April 2020 diff hist +100‎ Beginner's guide to working in Wales group ‎No edit summary
• 11:5911:59, 13 April 2020 diff hist +14‎ Beginner's guide to working in Wales group ‎ →‎How to add papers to group bib?
• 11:5811:58, 13 April 2020 diff hist +946‎ N Beginner's guide to working in Wales group ‎ Created page with "===How to add papers to group bib?=== *Make sure you are logged in to your workstation at the department. Whenever asked for a password, enter your admitto password. *Create..."
• 11:2711:27, 13 April 2020 diff hist +49‎ Comprehensive Contents Page ‎ →‎Miscellaneous

30 January 2020

• 11:0111:01, 30 January 2020 diff hist +401‎ Creating mismatched DNA duplex using NAB ‎No edit summary current
• 10:3510:35, 30 January 2020 diff hist +118‎ Creating mismatched DNA duplex using NAB ‎No edit summary
• 09:4209:42, 30 January 2020 diff hist +21‎ Creating mismatched DNA duplex using NAB ‎No edit summary
• 09:0509:05, 30 January 2020 diff hist +23‎ Creating mismatched DNA duplex using NAB ‎ →‎Merging pdb files
• 09:0209:02, 30 January 2020 diff hist +14‎ Creating mismatched DNA duplex using NAB ‎No edit summary

29 January 2020

• 18:2918:29, 29 January 2020 diff hist +1‎ Creating mismatched DNA duplex using NAB ‎No edit summary
• 18:2918:29, 29 January 2020 diff hist +1‎ Creating mismatched DNA duplex using NAB ‎No edit summary
• 18:2818:28, 29 January 2020 diff hist −289‎ Creating mismatched DNA duplex using NAB ‎No edit summary
• 16:1516:15, 29 January 2020 diff hist +5‎ Creating mismatched DNA duplex using NAB ‎No edit summary
• 16:1316:13, 29 January 2020 diff hist −4‎ Creating mismatched DNA duplex using NAB ‎No edit summary
• 16:0716:07, 29 January 2020 diff hist +10‎ Creating mismatched DNA duplex using NAB ‎No edit summary
• 16:0416:04, 29 January 2020 diff hist −2‎ Creating mismatched DNA duplex using NAB ‎No edit summary
• 16:0316:03, 29 January 2020 diff hist +3,280‎ Creating mismatched DNA duplex using NAB ‎No edit summary
• 15:3315:33, 29 January 2020 diff hist +53‎ Creating mismatched DNA duplex using NAB ‎No edit summary
• 15:2915:29, 29 January 2020 diff hist +561‎ N Creating mismatched DNA duplex using NAB ‎ Created page with "This can be done using NAB which comes as a part of Ambertools. The strategy would be to create two Watson Crick duplexes such that one of them contains our desired 5'-3' stra..."
• 15:2115:21, 29 January 2020 diff hist +47‎ Comprehensive Contents Page ‎ →‎AMBER