CamCASP/PFIT: Difference between revisions
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import>Am592 |
import>Am592 |
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End |
End |
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Data H2_daTZ_000.p2p |
Data H2_daTZ_000.p2p ! Point-to-point pols for this frequency only |
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#include H2_daTZ.sites |
#include H2_daTZ.sites ! Sites of this molecule |
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#include H2_daTZ.axes |
#include H2_daTZ.axes ! Axis file |
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Polarizabilities |
Polarizabilities |
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End |
End |
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Frequencies 0 omega0 0.5 |
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Frequencies 0 omega0 0.5 |
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Fix |
Fix |
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Finish |
Finish |
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</pre> |
</pre> |
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The output looks like: |
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<pre> |
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$ ~/CamCASP/5.5-dev/bin/pfit < NL.data |
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Batch 1: 2000 points |
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Sites |
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H1 0.000000 0.000000 0.000000 |
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*** Warning: type H was not defined |
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H2 0.000000 0.000000 1.448736 |
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1 passes |
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Polarizability parameters |
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Sites Components Coefficient |
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1 H1_H1_00_00_A |
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H1 H1 00 00 1.000 |
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2 H1_H1_00_10_A |
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H1 H1 00 10 1.000 |
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3 H1_H1_10_10_A |
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H1 H1 10 10 1.000 |
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4 H1_H1_11c_11c_A |
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H1 H1 11c 11c 1.000 |
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5 H1_H1_11s_11s_A |
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H1 H1 11s 11s 1.000 |
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6 H1_H2_00_00_A |
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... |
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... |
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15 H2_H2_11c_11c_A |
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H2 H2 11c 11c 1.000 |
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16 H2_H2_11s_11s_A |
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H2 H2 11s 11s 1.000 |
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Fix H1_H1_00_00_A = 0.00045 |
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Fix H1_H1_00_10_A = 0.00050 |
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Fix H1_H1_10_10_A = 2.02890 |
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Fix H1_H1_11c_11c_A = 1.55715 |
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Fix H1_H1_11s_11s_A = 1.55715 |
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Fix H1_H2_00_00_A = -0.00045 |
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Fix H1_H2_00_10_A = 0.00050 |
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Fix H1_H2_10_00_A = -0.00050 |
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Fix H1_H2_10_10_A = 1.42282 |
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Fix H1_H2_11c_11c_A = 0.95224 |
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Fix H1_H2_11s_11s_A = 0.95224 |
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Fix H2_H2_00_00_A = 0.00045 |
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Fix H2_H2_00_10_A = -0.00050 |
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Fix H2_H2_10_10_A = 2.02890 |
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Fix H2_H2_11c_11c_A = 1.55715 |
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Fix H2_H2_11s_11s_A = 1.55715 |
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Static polarizabilities |
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Response values: |
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Maximum 0.0129773408 |
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Minimum -0.0092483859 |
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Range 0.0222257267 |
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Min. magnitude 0.0000000005 |
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Residuals per cent of range |
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Maximum 0.00091849 4.133 |
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Minimum -0.00169831 -7.641 |
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R.m.s. 0.00007701 0.346 |
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Parameter values |
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H1_H1_00_00_A 0.00045175 |
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H1_H1_00_10_A 0.00049875 |
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H1_H1_10_10_A 2.02890222 |
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H1_H1_11c_11c_A 1.55715064 |
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H1_H1_11s_11s_A 1.55715064 |
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H1_H2_00_00_A -0.00045175 |
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H1_H2_00_10_A 0.00050214 |
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H1_H2_10_00_A -0.00049877 |
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H1_H2_10_10_A 1.42282188 |
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H1_H2_11c_11c_A 0.95223742 |
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H1_H2_11s_11s_A 0.95223742 |
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H2_H2_00_00_A 0.00045175 |
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H2_H2_00_10_A -0.00050211 |
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H2_H2_10_10_A 2.02889987 |
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H2_H2_11c_11c_A 1.55715064 |
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H2_H2_11s_11s_A 1.55715064 |
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Total static molecular polarizability |
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00 z x y |
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0.00000 0.00000 0.00000 0.00000 |
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0.00000 6.90149 0.00000 0.00000 |
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0.00000 0.00000 5.01878 0.00000 |
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0.00000 0.00000 0.00000 5.01878 |
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Mean polarizability = 5.64635 |
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Polarizability anisotropy = 1.88272 |
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Total static molecular polarizability |
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00 z x y |
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0.00000 0.00000 0.00000 0.00000 |
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0.00000 6.90149 0.00000 0.00000 |
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0.00000 0.00000 5.01878 0.00000 |
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0.00000 0.00000 0.00000 5.01878 |
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Mean polarizability = 5.64635 |
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Polarizability anisotropy = 1.88272 |
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</pre> |
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===Non-Local Models=== |
===Non-Local Models=== |
Revision as of 19:48, 22 September 2010
CamCASP => PFIT
PFIT : Purpose
- Refining local polarizability models against point-to-point polarizabilities calculated with the FDDS (using CamCASP).
- Local polarizabilty models only.
- Assessing polarizability models against the point-to-point polarizabilities.
- Local and non-local models.
- Calculate molecular and distributed <math>C_6</math> coefficients.
- Local and non-local models.
- Now not so relevant (though may still be useful) as the CASIMIR program does this and more.
Assessing Models
Local Models
Allocate points 2000 batches 1 rank 1 sites 4 parameters 32 End Data H2_daTZ_000.p2p ! Point-to-point pols for this frequency only #include H2_daTZ.sites ! Sites of this molecule #include H2_daTZ.axes ! Axis file Polarizabilities H1 H1 00 00 = H1_H1_00_00_A H1 H1 00 10 = H1_H1_00_10_A H1 H1 10 10 = H1_H1_10_10_A H1 H1 11c 11c = H1_H1_11c_11c_A H1 H1 11s 11s = H1_H1_11s_11s_A H1 H2 00 00 = H1_H2_00_00_A H1 H2 00 10 = H1_H2_00_10_A H1 H2 10 00 = H1_H2_10_00_A H1 H2 10 10 = H1_H2_10_10_A H1 H2 11c 11c = H1_H2_11c_11c_A H1 H2 11s 11s = H1_H2_11s_11s_A H2 H2 00 00 = H2_H2_00_00_A H2 H2 00 10 = H2_H2_00_10_A H2 H2 10 10 = H2_H2_10_10_A H2 H2 11c 11c = H2_H2_11c_11c_A H2 H2 11s 11s = H2_H2_11s_11s_A End Frequencies 0 omega0 0.5 Fix H1_H1_00_00_A +++ 0.00045175 H1_H1_00_10_A +++ 0.00049875 H1_H1_10_10_A +++ 2.02890222 H1_H1_11c_11c_A +++ 1.55715064 H1_H1_11s_11s_A +++ 1.55715064 H1_H2_00_00_A +++ -0.00045175 H1_H2_00_10_A +++ 0.00050214 H1_H2_10_00_A +++ -0.00049877 H1_H2_10_10_A +++ 1.42282188 H1_H2_11c_11c_A +++ 0.95223742 H1_H2_11s_11s_A +++ 0.95223742 H2_H2_00_00_A +++ 0.00045175 H2_H2_00_10_A +++ -0.00050211 H2_H2_10_10_A +++ 2.02889987 H2_H2_11c_11c_A +++ 1.55715064 H2_H2_11s_11s_A +++ 1.55715064 End Start Print parameters total Print Total Origin 0.0 0.0 0.0 Finish
The output looks like:
$ ~/CamCASP/5.5-dev/bin/pfit < NL.data Batch 1: 2000 points Sites H1 0.000000 0.000000 0.000000 *** Warning: type H was not defined H2 0.000000 0.000000 1.448736 1 passes Polarizability parameters Sites Components Coefficient 1 H1_H1_00_00_A H1 H1 00 00 1.000 2 H1_H1_00_10_A H1 H1 00 10 1.000 3 H1_H1_10_10_A H1 H1 10 10 1.000 4 H1_H1_11c_11c_A H1 H1 11c 11c 1.000 5 H1_H1_11s_11s_A H1 H1 11s 11s 1.000 6 H1_H2_00_00_A ... ... 15 H2_H2_11c_11c_A H2 H2 11c 11c 1.000 16 H2_H2_11s_11s_A H2 H2 11s 11s 1.000 Fix H1_H1_00_00_A = 0.00045 Fix H1_H1_00_10_A = 0.00050 Fix H1_H1_10_10_A = 2.02890 Fix H1_H1_11c_11c_A = 1.55715 Fix H1_H1_11s_11s_A = 1.55715 Fix H1_H2_00_00_A = -0.00045 Fix H1_H2_00_10_A = 0.00050 Fix H1_H2_10_00_A = -0.00050 Fix H1_H2_10_10_A = 1.42282 Fix H1_H2_11c_11c_A = 0.95224 Fix H1_H2_11s_11s_A = 0.95224 Fix H2_H2_00_00_A = 0.00045 Fix H2_H2_00_10_A = -0.00050 Fix H2_H2_10_10_A = 2.02890 Fix H2_H2_11c_11c_A = 1.55715 Fix H2_H2_11s_11s_A = 1.55715 Static polarizabilities Response values: Maximum 0.0129773408 Minimum -0.0092483859 Range 0.0222257267 Min. magnitude 0.0000000005 Residuals per cent of range Maximum 0.00091849 4.133 Minimum -0.00169831 -7.641 R.m.s. 0.00007701 0.346 Parameter values H1_H1_00_00_A 0.00045175 H1_H1_00_10_A 0.00049875 H1_H1_10_10_A 2.02890222 H1_H1_11c_11c_A 1.55715064 H1_H1_11s_11s_A 1.55715064 H1_H2_00_00_A -0.00045175 H1_H2_00_10_A 0.00050214 H1_H2_10_00_A -0.00049877 H1_H2_10_10_A 1.42282188 H1_H2_11c_11c_A 0.95223742 H1_H2_11s_11s_A 0.95223742 H2_H2_00_00_A 0.00045175 H2_H2_00_10_A -0.00050211 H2_H2_10_10_A 2.02889987 H2_H2_11c_11c_A 1.55715064 H2_H2_11s_11s_A 1.55715064 Total static molecular polarizability 00 z x y 0.00000 0.00000 0.00000 0.00000 0.00000 6.90149 0.00000 0.00000 0.00000 0.00000 5.01878 0.00000 0.00000 0.00000 0.00000 5.01878 Mean polarizability = 5.64635 Polarizability anisotropy = 1.88272 Total static molecular polarizability 00 z x y 0.00000 0.00000 0.00000 0.00000 0.00000 6.90149 0.00000 0.00000 0.00000 0.00000 5.01878 0.00000 0.00000 0.00000 0.00000 5.01878 Mean polarizability = 5.64635 Polarizability anisotropy = 1.88272