import>Csw34 at 14:25, 13 May 2008

2008-05-13T14:25:52Z

← Older revision		Revision as of 14:25, 13 May 2008
Line 2:		Line 2:

	<pre>		<pre>
			chmod 755 perm-pdb.py
	./perm-pdb.py <NAME-PDB-FILE>		./perm-pdb.py <NAME-PDB-FILE>
	</pre>		</pre>

import>Csw34 at 14:24, 13 May 2008

2008-05-13T14:24:18Z

New page

This program creates a ''perm.allow'' file from a pdb. The script is located [[Media:Perm-pdb.txt | here]]. It is used as follows:

<pre>
./perm-pdb.py <NAME-PDB-FILE>
</pre>

Ensure that all residue names are as expected in the [[AMBER]] libraries i.e. the terminal residues should be named correctly.

Perm-pdb.py - Revision history

import>Csw34 at 14:25, 13 May 2008

import>Csw34 at 14:24, 13 May 2008